H MIYS930101 D Base-substitution-protein-stability matrix (Miyazawa-Jernigan, 1993) R LIT:1913158 PMID:8506261 A Miyazawa, S. and Jernigan, R.L. T A new substitution matrix for protein sequence searches based on contact frequencies in protein structures J Protein Engineering 6, 267-278 (1993) M rows = ARNDCQEGHILKMFPSTWYV, cols = ARNDCQEGHILKMFPSTWYV 0.34 -0.08 0.65 -0.16 0.01 0.38 0.04 -0.06 0.20 0.36 -0.51 -0.35 -0.46 -0.41 1.02 -0.16 0.15 0.20 0.16 -0.74 0.48 0.03 -0.02 0.19 0.32 -0.64 0.25 0.36 0.19 0.20 -0.11 0.15 -0.18 -0.14 0.13 0.43 -0.21 0.11 0.21 0.18 -0.29 0.37 0.13 -0.19 0.54 -0.45 -0.82 -0.83 -0.78 -0.13 -0.95 -0.86 -0.58 -0.69 0.75 -0.45 -0.74 -0.90 -0.75 -0.02 -0.74 -0.80 -0.56 -0.50 0.48 0.61 -0.20 0.04 0.38 0.16 -0.81 0.30 0.25 -0.16 0.14 -1.01 -1.06 0.49 -0.47 -0.83 -0.97 -0.90 -0.29 -0.97 -0.87 -0.61 -0.86 0.67 0.50 -1.03 0.97 -0.47 -0.79 -0.71 -0.62 0.39 -0.85 -0.81 -0.52 -0.43 0.45 0.48 -1.03 0.35 0.61 0.17 0.14 -0.12 -0.15 -0.65 0.15 -0.13 -0.14 0.14 -0.78 -0.67 -0.14 -0.82 -0.76 0.56 0.16 0.05 -0.02 -0.14 -0.20 -0.20 -0.19 0.00 -0.15 -0.68 -0.70 -0.14 -0.75 -0.53 0.24 0.48 0.18 0.00 0.11 -0.10 -0.62 -0.07 -0.09 -0.09 -0.13 -0.59 -0.77 0.09 -0.61 -0.75 0.25 0.28 0.45 -0.51 -0.26 -0.79 -0.64 0.82 -0.83 -0.66 -0.15 -0.70 -0.23 0.13 -0.92 0.04 0.25 -0.71 -0.29 -0.70 1.42 -0.34 -0.31 0.12 0.09 0.40 -0.02 -0.11 -0.35 0.35 -0.35 -0.27 -0.12 -0.56 0.14 -0.20 -0.04 -0.27 0.00 0.84 -0.06 -0.54 -0.69 -0.39 -0.19 -0.68 -0.42 -0.15 -0.59 0.41 0.41 -0.79 0.41 0.36 -0.47 -0.44 -0.44 -0.17 -0.39 0.54 //